Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.13□□□□□ -0.31
TRGV3P03979 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.13□□□□□ -0.31
TRGV3P03979 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.13□□□□□ -0.31
TRGV3P03979 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.13□□□□□ -0.31
TRGV3P03979 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 AC006277.1-201ENST00000624348 1610 ntBASIC13.13□□□□□ -0.31
TRGV3P03979 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRGV3P03979 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRGV3P03979 BCAR1-209ENST00000546196 1340 ntBASIC13.13□□□□□ -0.31
TRGV3P03979 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.13□□□□□ -0.31
TRGV3P03979 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRGV3P03979 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
TRGV3P03979 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.12□□□□□ -0.31
TRGV3P03979 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.12□□□□□ -0.31
TRGV3P03979 AL118508.1-201ENST00000613502 2345 ntBASIC13.12□□□□□ -0.31
TRGV3P03979 AL645728.1-201ENST00000366221 2101 ntBASIC13.12□□□□□ -0.31
TRGV3P03979 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRGV3P03979 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRGV3P03979 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
TRGV3P03979 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
TRGV3P03979 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRGV3P03979 POLD2P1-201ENST00000511220 997 ntBASIC13.12□□□□□ -0.31
TRGV3P03979 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.12□□□□□ -0.31
TRGV3P03979 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.12□□□□□ -0.31
TRGV3P03979 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.12□□□□□ -0.31
TRGV3P03979 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 MIR4515-201ENST00000584082 81 ntBASIC13.12□□□□□ -0.31
TRGV3P03979 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.12□□□□□ -0.31
TRGV3P03979 AL645728.2-201ENST00000641974 660 ntBASIC13.12□□□□□ -0.31
TRGV3P03979 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.12□□□□□ -0.31
TRGV3P03979 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRGV3P03979 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRGV3P03979 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.12□□□□□ -0.31
TRGV3P03979 AC018695.7-201ENST00000624587 2492 ntBASIC13.12□□□□□ -0.31
TRGV3P03979 SLC22A20-204ENST00000530038 1673 ntBASIC13.12□□□□□ -0.31
TRGV3P03979 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV3P03979 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRGV3P03979 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.11□□□□□ -0.31
TRGV3P03979 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV3P03979 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 MIR574-201ENST00000385209 96 ntBASIC13.11□□□□□ -0.31
TRGV3P03979 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TRGV3P03979 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.11□□□□□ -0.31
TRGV3P03979 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.11□□□□□ -0.31
TRGV3P03979 KRT18P2-201ENST00000447938 1258 ntBASIC13.11□□□□□ -0.31
TRGV3P03979 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV3P03979 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
TRGV3P03979 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
TRGV3P03979 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms