Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 ME2P1-201ENST00000426028 1970 ntBASIC17.03■□□□□ 0.32
MT-ND3P03897 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.03■□□□□ 0.32
MT-ND3P03897 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.03■□□□□ 0.32
MT-ND3P03897 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.03■□□□□ 0.32
MT-ND3P03897 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
MT-ND3P03897 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.03■□□□□ 0.32
MT-ND3P03897 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MT-ND3P03897 AD001527.2-201ENST00000622994 785 ntBASIC17.03■□□□□ 0.32
MT-ND3P03897 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
MT-ND3P03897 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.03■□□□□ 0.32
MT-ND3P03897 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MT-ND3P03897 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MT-ND3P03897 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.03■□□□□ 0.32
MT-ND3P03897 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MT-ND3P03897 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MT-ND3P03897 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MT-ND3P03897 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.02■□□□□ 0.32
MT-ND3P03897 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
MT-ND3P03897 AL021920.2-201ENST00000624828 1351 ntBASIC17.02■□□□□ 0.32
MT-ND3P03897 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND3P03897 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND3P03897 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND3P03897 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND3P03897 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.02■□□□□ 0.32
MT-ND3P03897 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
MT-ND3P03897 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND3P03897 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
MT-ND3P03897 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
MT-ND3P03897 RPS2P28-201ENST00000314255 741 ntBASIC17.02■□□□□ 0.32
MT-ND3P03897 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.02■□□□□ 0.32
MT-ND3P03897 AL590627.1-203ENST00000421194 1026 ntBASIC17.02■□□□□ 0.32
MT-ND3P03897 AP000347.1-202ENST00000435868 847 ntBASIC17.02■□□□□ 0.32
MT-ND3P03897 HLA-J-202ENST00000469281 1241 ntBASIC17.02■□□□□ 0.32
MT-ND3P03897 AC073648.2-201ENST00000510116 352 ntBASIC17.02■□□□□ 0.32
MT-ND3P03897 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.02■□□□□ 0.32
MT-ND3P03897 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.02■□□□□ 0.32
MT-ND3P03897 AC120114.3-201ENST00000611923 658 ntBASIC17.02■□□□□ 0.32
MT-ND3P03897 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
MT-ND3P03897 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.02■□□□□ 0.31
MT-ND3P03897 AC105917.1-201ENST00000506637 2539 ntBASIC17.02■□□□□ 0.31
MT-ND3P03897 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND3P03897 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND3P03897 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND3P03897 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND3P03897 AC006538.1-201ENST00000567905 1585 ntBASIC17.02■□□□□ 0.31
MT-ND3P03897 MTHFR-217ENST00000641820 1569 ntBASIC17.02■□□□□ 0.31
MT-ND3P03897 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
MT-ND3P03897 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
MT-ND3P03897 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND3P03897 AL365203.3-201ENST00000609742 2057 ntBASIC17.01■□□□□ 0.31
MT-ND3P03897 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-ND3P03897 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
MT-ND3P03897 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
MT-ND3P03897 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
MT-ND3P03897 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
MT-ND3P03897 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
MT-ND3P03897 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MT-ND3P03897 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.01■□□□□ 0.31
MT-ND3P03897 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MT-ND3P03897 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.01■□□□□ 0.31
MT-ND3P03897 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.01■□□□□ 0.31
MT-ND3P03897 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.01■□□□□ 0.31
MT-ND3P03897 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.01■□□□□ 0.31
MT-ND3P03897 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
MT-ND3P03897 AC011467.2-201ENST00000598425 242 ntBASIC17.01■□□□□ 0.31
MT-ND3P03897 AL355877.3-201ENST00000622820 899 ntBASIC17.01■□□□□ 0.31
MT-ND3P03897 TP73-AS1-207ENST00000624167 988 ntBASIC17.01■□□□□ 0.31
MT-ND3P03897 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MT-ND3P03897 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-ND3P03897 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND3P03897 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms