Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 FAM58CP-201ENST00000435741 640 ntBASIC12.86□□□□□ -0.35
TRBV12-3P01733 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 HLA-J-202ENST00000469281 1241 ntBASIC12.86□□□□□ -0.35
TRBV12-3P01733 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 AC092865.5-201ENST00000545435 363 ntBASIC12.86□□□□□ -0.35
TRBV12-3P01733 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 AC010327.4-202ENST00000591484 748 ntBASIC12.86□□□□□ -0.35
TRBV12-3P01733 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV12-3P01733 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.86□□□□□ -0.35
TRBV12-3P01733 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 PCDH8P1-201ENST00000428983 2773 ntBASIC12.85□□□□□ -0.35
TRBV12-3P01733 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV12-3P01733 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV12-3P01733 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV12-3P01733 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV12-3P01733 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms