Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.79■□□□□ 0.12
CLPTM1O96005 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 HBZP1-201ENST00000354915 429 ntBASIC15.79■□□□□ 0.12
CLPTM1O96005 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLPTM1O96005 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLPTM1O96005 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CLPTM1O96005 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLPTM1O96005 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CLPTM1O96005 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLPTM1O96005 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.78■□□□□ 0.12
CLPTM1O96005 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.78■□□□□ 0.12
CLPTM1O96005 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.78■□□□□ 0.12
CLPTM1O96005 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPTM1O96005 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.78■□□□□ 0.12
CLPTM1O96005 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CLPTM1O96005 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CLPTM1O96005 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPTM1O96005 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPTM1O96005 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPTM1O96005 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 AL391807.1-203ENST00000604392 2365 ntBASIC15.78■□□□□ 0.12
CLPTM1O96005 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPTM1O96005 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.78■□□□□ 0.12
CLPTM1O96005 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLPTM1O96005 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.78■□□□□ 0.12
CLPTM1O96005 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CLPTM1O96005 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CLPTM1O96005 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPTM1O96005 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPTM1O96005 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPTM1O96005 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.77■□□□□ 0.12
CLPTM1O96005 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.77■□□□□ 0.12
CLPTM1O96005 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CLPTM1O96005 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.77■□□□□ 0.12
CLPTM1O96005 ZNF444P1-201ENST00000559497 298 ntBASIC15.77■□□□□ 0.12
CLPTM1O96005 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms