Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCL13O43927 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.9□□□□□ -0.02
CXCL13O43927 AC006538.1-201ENST00000567905 1585 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.89□□□□□ -0.03
CXCL13O43927 PCDHA12-202ENST00000613593 2588 ntBASIC14.89□□□□□ -0.03
CXCL13O43927 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CXCL13O43927 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 KRT8P48-201ENST00000515599 1220 ntBASIC14.89□□□□□ -0.03
CXCL13O43927 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.89□□□□□ -0.03
CXCL13O43927 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.89□□□□□ -0.03
CXCL13O43927 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.89□□□□□ -0.03
CXCL13O43927 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.89□□□□□ -0.03
CXCL13O43927 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.89□□□□□ -0.03
CXCL13O43927 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CXCL13O43927 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.89□□□□□ -0.03
CXCL13O43927 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CXCL13O43927 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CXCL13O43927 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CXCL13O43927 AKAP8P1-201ENST00000434743 1349 ntBASIC14.89□□□□□ -0.03
CXCL13O43927 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL13O43927 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CXCL13O43927 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCL13O43927 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCL13O43927 AC254562.1-201ENST00000417586 456 ntBASIC14.88□□□□□ -0.03
CXCL13O43927 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCL13O43927 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCL13O43927 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCL13O43927 HLA-J-202ENST00000469281 1241 ntBASIC14.88□□□□□ -0.03
CXCL13O43927 KRT18P34-201ENST00000488218 1270 ntBASIC14.88□□□□□ -0.03
CXCL13O43927 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCL13O43927 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCL13O43927 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCL13O43927 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CXCL13O43927 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.88□□□□□ -0.03
CXCL13O43927 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CXCL13O43927 AC105339.1-204ENST00000636249 355 ntBASIC14.88□□□□□ -0.03
CXCL13O43927 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCL13O43927 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCL13O43927 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCL13O43927 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL13O43927 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CXCL13O43927 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms