Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXN3O00409 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
FOXN3O00409 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
FOXN3O00409 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN3O00409 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
FOXN3O00409 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXN3O00409 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN3O00409 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.82■□□□□ 0.44
FOXN3O00409 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
FOXN3O00409 AL121894.2-201ENST00000602977 491 ntBASIC17.82■□□□□ 0.44
FOXN3O00409 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.82■□□□□ 0.44
FOXN3O00409 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN3O00409 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 MTHFR-217ENST00000641820 1569 ntBASIC17.82■□□□□ 0.44
FOXN3O00409 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
FOXN3O00409 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN3O00409 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.82■□□□□ 0.44
FOXN3O00409 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN3O00409 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN3O00409 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
FOXN3O00409 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
FOXN3O00409 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FOXN3O00409 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FOXN3O00409 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FOXN3O00409 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
FOXN3O00409 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
FOXN3O00409 AL513523.2-202ENST00000427283 2040 ntBASIC17.81■□□□□ 0.44
FOXN3O00409 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FOXN3O00409 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FOXN3O00409 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FOXN3O00409 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN3O00409 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FOXN3O00409 Z83851.2-201ENST00000609564 659 ntBASIC17.81■□□□□ 0.44
FOXN3O00409 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXN3O00409 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.81■□□□□ 0.44
FOXN3O00409 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN3O00409 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN3O00409 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
FOXN3O00409 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN3O00409 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 LINC01144-201ENST00000626198 1710 ntBASIC17.81■□□□□ 0.44
FOXN3O00409 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN3O00409 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
FOXN3O00409 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXN3O00409 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXN3O00409 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXN3O00409 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
FOXN3O00409 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
FOXN3O00409 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXN3O00409 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXN3O00409 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.8■□□□□ 0.44
FOXN3O00409 RHOQP3-201ENST00000437982 621 ntBASIC17.8■□□□□ 0.44
FOXN3O00409 FDX1P1-201ENST00000449115 551 ntBASIC17.8■□□□□ 0.44
FOXN3O00409 AC079776.4-201ENST00000511039 504 ntBASIC17.8■□□□□ 0.44
FOXN3O00409 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXN3O00409 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXN3O00409 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXN3O00409 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXN3O00409 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
FOXN3O00409 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.8■□□□□ 0.44
FOXN3O00409 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN3O00409 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
FOXN3O00409 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXN3O00409 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN3O00409 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXN3O00409 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN3O00409 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms