Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 AL592309.1-201ENST00000443127 649 ntBASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 AC025678.2-201ENST00000562061 970 ntBASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 AL161645.1-201ENST00000622716 1255 ntBASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 LINC00628-201ENST00000628516 1289 ntBASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 AL627223.1-201ENST00000416693 442 ntBASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 HLA-J-203ENST00000494367 1087 ntBASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 AC109322.1-201ENST00000524499 1264 ntBASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 AP002490.2-201ENST00000524791 560 ntBASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 DUX4L17-201ENST00000557360 1267 ntBASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 RARRES2P8-201ENST00000566335 367 ntBASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA2E9PIF3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 MIR770-201ENST00000390219 98 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms