Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.26■□□□□ 0.03
CENPBD1B2RD01 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 PAUPAR-201ENST00000630360 2965 ntBASIC15.26■□□□□ 0.03
CENPBD1B2RD01 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CENPBD1B2RD01 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 AC004817.3-201ENST00000602957 2129 ntBASIC15.25■□□□□ 0.03
CENPBD1B2RD01 TUBB8P12-201ENST00000308911 1335 ntBASIC15.25■□□□□ 0.03
CENPBD1B2RD01 TUBB7P-202ENST00000428444 1305 ntBASIC15.25■□□□□ 0.03
CENPBD1B2RD01 TUBB8P7-204ENST00000567960 1332 ntBASIC15.25■□□□□ 0.03
CENPBD1B2RD01 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 SAPCD2P3-201ENST00000455031 850 ntBASIC15.25■□□□□ 0.03
CENPBD1B2RD01 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 AL353135.1-201ENST00000606729 504 ntBASIC15.25■□□□□ 0.03
CENPBD1B2RD01 AL732292.2-201ENST00000609649 430 ntBASIC15.25■□□□□ 0.03
CENPBD1B2RD01 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CENPBD1B2RD01 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 FRMD8P1-201ENST00000440433 1524 ntBASIC15.24■□□□□ 0.03
CENPBD1B2RD01 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 FGFR3P6-201ENST00000457012 610 ntBASIC15.24■□□□□ 0.03
CENPBD1B2RD01 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.24■□□□□ 0.03
CENPBD1B2RD01 NKAPP1-205ENST00000585790 367 ntBASIC15.24■□□□□ 0.03
CENPBD1B2RD01 AC008608.2-201ENST00000606089 416 ntBASIC15.24■□□□□ 0.03
CENPBD1B2RD01 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms