Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRRM3A6NNA2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 AC254562.1-201ENST00000417586 456 ntBASIC17.3■□□□□ 0.36
SRRM3A6NNA2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 AC005829.1-201ENST00000570002 483 ntBASIC17.3■□□□□ 0.36
SRRM3A6NNA2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRRM3A6NNA2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 AC092474.2-201ENST00000424288 719 ntBASIC17.29■□□□□ 0.36
SRRM3A6NNA2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.29■□□□□ 0.36
SRRM3A6NNA2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 RCN1P2-201ENST00000398357 915 ntBASIC17.28■□□□□ 0.36
SRRM3A6NNA2 KRT18P65-201ENST00000439811 1286 ntBASIC17.28■□□□□ 0.36
SRRM3A6NNA2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms