Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 AC092384.3-202ENST00000564646 2873 ntBASIC13□□□□□ -0.33
TRAV5A0A0B4J249 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 GGT3P-204ENST00000453783 1664 ntBASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 AC243591.1-201ENST00000452967 1364 ntBASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 BX276092.5-203ENST00000456199 560 ntBASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 AC096582.2-201ENST00000510860 516 ntBASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 AL136038.3-201ENST00000561909 1096 ntBASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 AC023824.1-201ENST00000562945 2975 ntBASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAV5A0A0B4J249 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 SPDYE21P-201ENST00000413323 827 ntBASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 AC211429.1-201ENST00000415277 523 ntBASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 CHCHD2P8-201ENST00000429873 447 ntBASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 AC013467.2-201ENST00000605472 835 ntBASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 AP000867.4-201ENST00000641616 219 ntBASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV5A0A0B4J249 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms