Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 AL513210.1-201ENST00000629608 234 ntBASIC17.29■□□□□ 0.36
RAD54BQ9Y620 AC105339.1-204ENST00000636249 355 ntBASIC17.29■□□□□ 0.36
RAD54BQ9Y620 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD54BQ9Y620 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.28■□□□□ 0.36
RAD54BQ9Y620 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.28■□□□□ 0.36
RAD54BQ9Y620 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 AC004835.2-201ENST00000603762 682 ntBASIC17.28■□□□□ 0.36
RAD54BQ9Y620 LINC02084-201ENST00000606069 1096 ntBASIC17.28■□□□□ 0.36
RAD54BQ9Y620 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 KRT8P39-201ENST00000396270 1433 ntBASIC17.28■□□□□ 0.36
RAD54BQ9Y620 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD54BQ9Y620 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 AC112191.1-201ENST00000523689 701 ntBASIC17.27■□□□□ 0.36
RAD54BQ9Y620 AC087641.1-201ENST00000557561 1021 ntBASIC17.27■□□□□ 0.36
RAD54BQ9Y620 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD54BQ9Y620 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.27■□□□□ 0.35
RAD54BQ9Y620 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAD54BQ9Y620 PCDHA14-201ENST00000506751 2298 ntBASIC17.27■□□□□ 0.35
RAD54BQ9Y620 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAD54BQ9Y620 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RAD54BQ9Y620 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAD54BQ9Y620 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAD54BQ9Y620 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RAD54BQ9Y620 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RAD54BQ9Y620 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms