Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 AC023141.5-201ENST00000458585 616 ntBASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 LINC01451-201ENST00000623792 534 ntBASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 AL645728.2-201ENST00000641974 660 ntBASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA3Q9Y5H0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 REXO1L11P-201ENST00000620964 1927 ntBASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 FAM86C2P-203ENST00000528684 1004 ntBASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 AC092919.2-201ENST00000623631 1645 ntBASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 AC105020.1-201ENST00000435356 2205 ntBASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGA3Q9Y5H0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA3Q9Y5H0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms