Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 NAPSB-206ENST00000562112 1266 ntBASIC15.81■□□□□ 0.12
AP4S1Q9Y587 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 AC013467.2-201ENST00000605472 835 ntBASIC15.81■□□□□ 0.12
AP4S1Q9Y587 AC006277.1-201ENST00000624348 1610 ntBASIC15.81■□□□□ 0.12
AP4S1Q9Y587 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 PPT1-215ENST00000641471 2368 ntBASIC15.81■□□□□ 0.12
AP4S1Q9Y587 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4S1Q9Y587 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 AC125634.1-201ENST00000438758 1403 ntBASIC15.8■□□□□ 0.12
AP4S1Q9Y587 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 MIR662-201ENST00000384847 95 ntBASIC15.8■□□□□ 0.12
AP4S1Q9Y587 FAM220CP-201ENST00000395253 831 ntBASIC15.8■□□□□ 0.12
AP4S1Q9Y587 TSPY7P-201ENST00000431358 1114 ntBASIC15.8■□□□□ 0.12
AP4S1Q9Y587 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 FAM201B-201ENST00000458407 597 ntBASIC15.8■□□□□ 0.12
AP4S1Q9Y587 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 AC112504.1-201ENST00000623415 1841 ntBASIC15.8■□□□□ 0.12
AP4S1Q9Y587 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4S1Q9Y587 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 AC097637.2-201ENST00000624096 1997 ntBASIC15.79■□□□□ 0.12
AP4S1Q9Y587 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 AC003669.1-201ENST00000334569 611 ntBASIC15.79■□□□□ 0.12
AP4S1Q9Y587 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 AL158047.1-201ENST00000445918 881 ntBASIC15.79■□□□□ 0.12
AP4S1Q9Y587 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP4S1Q9Y587 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms