Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 AC020765.3-201ENST00000613051 740 ntBASIC17.29■□□□□ 0.36
YIPF1Q9Y548 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 AL645608.8-201ENST00000606034 2086 ntBASIC17.28■□□□□ 0.36
YIPF1Q9Y548 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 AL031731.1-201ENST00000642131 2094 ntBASIC17.28■□□□□ 0.36
YIPF1Q9Y548 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 GPAA1P2-202ENST00000606848 1787 ntBASIC17.28■□□□□ 0.36
YIPF1Q9Y548 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.28■□□□□ 0.36
YIPF1Q9Y548 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 SERBP1P5-201ENST00000510079 1181 ntBASIC17.28■□□□□ 0.36
YIPF1Q9Y548 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 AC105021.1-202ENST00000570572 669 ntBASIC17.28■□□□□ 0.36
YIPF1Q9Y548 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 CETN4P-206ENST00000642099 2168 ntBASIC17.28■□□□□ 0.36
YIPF1Q9Y548 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.28■□□□□ 0.36
YIPF1Q9Y548 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 AC015922.1-201ENST00000421102 1152 ntBASIC17.27■□□□□ 0.36
YIPF1Q9Y548 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 RN7SL828P-201ENST00000607615 303 ntBASIC17.27■□□□□ 0.36
YIPF1Q9Y548 AL589739.1-201ENST00000607720 493 ntBASIC17.27■□□□□ 0.36
YIPF1Q9Y548 TEX28P1-201ENST00000613479 1221 ntBASIC17.27■□□□□ 0.36
YIPF1Q9Y548 TEX28P2-201ENST00000617764 1221 ntBASIC17.27■□□□□ 0.36
YIPF1Q9Y548 AF228730.6-201ENST00000641497 218 ntBASIC17.27■□□□□ 0.36
YIPF1Q9Y548 AC084121.3-201ENST00000641716 218 ntBASIC17.27■□□□□ 0.36
YIPF1Q9Y548 AC105233.6-201ENST00000642093 218 ntBASIC17.27■□□□□ 0.36
YIPF1Q9Y548 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
YIPF1Q9Y548 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
YIPF1Q9Y548 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
YIPF1Q9Y548 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms