Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA1Q9UND3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 MIR770-201ENST00000390219 98 ntBASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
NPIPA1Q9UND3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 AC023141.5-201ENST00000458585 616 ntBASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 AC107918.2-201ENST00000530817 355 ntBASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 AC026120.1-201ENST00000611536 926 ntBASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms