Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 RCN1P2-201ENST00000398357 915 ntBASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 AC074051.2-201ENST00000565115 352 ntBASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 PMPCAP1-201ENST00000508114 1576 ntBASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 AC126177.1-201ENST00000547829 2218 ntBASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 BNIP3P18-201ENST00000593976 575 ntBASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 FRMD8P1-201ENST00000440433 1524 ntBASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB4Q9UN71 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 TUBB8P12-201ENST00000308911 1335 ntBASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 TUBB7P-202ENST00000428444 1305 ntBASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 TUBB8P7-204ENST00000567960 1332 ntBASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB4Q9UN71 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms