Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZNRF3Q9ULT6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNRF3Q9ULT6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNRF3Q9ULT6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 AC092053.1-201ENST00000605787 1936 ntBASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 AC015936.2-201ENST00000593177 259 ntBASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 MIR8072-201ENST00000614241 80 ntBASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNRF3Q9ULT6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
ZNRF3Q9ULT6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZNRF3Q9ULT6 AC008764.6-201ENST00000595909 2069 ntBASIC19.77■□□□□ 0.75
ZNRF3Q9ULT6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZNRF3Q9ULT6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.77■□□□□ 0.75
ZNRF3Q9ULT6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ZNRF3Q9ULT6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 BOLA2P3-201ENST00000404566 256 ntBASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 AL139010.1-201ENST00000454878 894 ntBASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 CROCCP4-201ENST00000457096 498 ntBASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 AC020765.3-201ENST00000613051 740 ntBASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNRF3Q9ULT6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNRF3Q9ULT6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms