Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 RPS2P1-201ENST00000434010 821 ntBASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 MOK-208ENST00000519058 917 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 AL031008.1-201ENST00000619963 541 ntBASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 PI4KAP1-204ENST00000612579 1703 ntBASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 AL590787.1-201ENST00000568856 1315 ntBASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 AL031284.1-201ENST00000419297 478 ntBASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 CD63-210ENST00000550776 870 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 AL356488.2-201ENST00000602755 427 ntBASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 LINC02199-201ENST00000506655 2702 ntBASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00474Q9P2X8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00474Q9P2X8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms