Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 PDIA3P1-201ENST00000471856 1510 ntBASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 ELK2AP-201ENST00000392510 1007 ntBASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 AC024267.1-201ENST00000582320 895 ntBASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXXC1Q9P0U4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 KRT43P-201ENST00000434019 910 ntBASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 AC093724.1-201ENST00000448659 1027 ntBASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 AC026979.3-201ENST00000607315 403 ntBASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 AL589702.1-201ENST00000641229 1509 ntBASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 AC020907.1-201ENST00000616460 1350 ntBASIC17.65■□□□□ 0.42
CXXC1Q9P0U4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CXXC1Q9P0U4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.64■□□□□ 0.42
CXXC1Q9P0U4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.64■□□□□ 0.42
CXXC1Q9P0U4 KRT8P39-201ENST00000396270 1433 ntBASIC17.64■□□□□ 0.42
CXXC1Q9P0U4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 AC099336.1-201ENST00000417053 1171 ntBASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXXC1Q9P0U4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms