Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 AC135586.1-201ENST00000539323 574 ntBASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 API5-211ENST00000534695 560 ntTSL 5 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 AC004790.1-201ENST00000612686 536 ntBASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HCFC1R1Q9NWW0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 AC060834.1-201ENST00000443027 2032 ntBASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 AC093724.1-201ENST00000448659 1027 ntBASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 AL512361.1-201ENST00000554200 418 ntBASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 AC104794.3-201ENST00000566840 1248 ntBASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 TP53TG3HP-202ENST00000569755 579 ntBASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 AL008721.1-201ENST00000609964 604 ntBASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HCFC1R1Q9NWW0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
HCFC1R1Q9NWW0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms