Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 HMGA1P7-201ENST00000406908 502 ntBASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 HLA-J-202ENST00000469281 1241 ntBASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 MTDHP5-201ENST00000598980 586 ntBASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SDHAF3Q9NRP4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 AC004832.2-201ENST00000426397 482 ntBASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 DNAJB3-201ENST00000446806 729 ntBASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 MIR3909-201ENST00000579518 119 ntBASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 AC068137.2-201ENST00000605408 478 ntBASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 AC021097.1-201ENST00000607902 574 ntBASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 KRT8P39-201ENST00000396270 1433 ntBASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 AL645728.1-201ENST00000366221 2101 ntBASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SDHAF3Q9NRP4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 AC023274.1-201ENST00000418278 595 ntBASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms