Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 AL512652.2-201ENST00000625156 1716 ntBASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 AC078925.2-201ENST00000624013 1973 ntBASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 AC079776.1-201ENST00000401540 1152 ntBASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 RPS2P32-201ENST00000439199 892 ntBASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 AL606495.2-201ENST00000605867 535 ntBASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 AL844908.2-201ENST00000609461 460 ntBASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 RNF216P1-203ENST00000404404 2427 ntBASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PDLIM7Q9NR12 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 AL603756.1-201ENST00000606511 2163 ntBASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 DGCR5-201ENST00000399539 862 ntBASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 ACA64.2-201ENST00000459014 129 ntBASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 AC105233.2-201ENST00000523697 349 ntBASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 AF228730.5-201ENST00000530288 346 ntBASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 AC021097.1-201ENST00000607902 574 ntBASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM7Q9NR12 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms