Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 AC098831.1-202ENST00000438821 336 ntBASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 MIR4751-201ENST00000578027 74 ntBASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC40Q9H9A6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 AC012569.1-201ENST00000591191 1524 ntBASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 MRPL3P1-201ENST00000400109 1033 ntBASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 FAM185BP-201ENST00000443595 716 ntBASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 AL662844.1-201ENST00000546340 181 ntBASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC40Q9H9A6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.91■□□□□ 0.3
LRRC40Q9H9A6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms