Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
UBQLN3Q9H347 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 RPSAP43-201ENST00000402237 625 ntBASIC15.45■□□□□ 0.06
UBQLN3Q9H347 UPF3AP3-201ENST00000420996 769 ntBASIC15.45■□□□□ 0.06
UBQLN3Q9H347 GPX1P2-201ENST00000429271 606 ntBASIC15.45■□□□□ 0.06
UBQLN3Q9H347 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 KRT19P2-202ENST00000557173 1012 ntBASIC15.45■□□□□ 0.06
UBQLN3Q9H347 PDPK2P-202ENST00000562415 1191 ntBASIC15.45■□□□□ 0.06
UBQLN3Q9H347 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 MTDHP5-201ENST00000598980 586 ntBASIC15.45■□□□□ 0.06
UBQLN3Q9H347 GPALPP1-207ENST00000611650 899 ntBASIC15.45■□□□□ 0.06
UBQLN3Q9H347 AC004877.2-201ENST00000623941 599 ntBASIC15.45■□□□□ 0.06
UBQLN3Q9H347 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 CYP2T1P-202ENST00000641596 2535 ntBASIC15.45■□□□□ 0.06
UBQLN3Q9H347 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UBQLN3Q9H347 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 AC023141.13-201ENST00000604991 943 ntBASIC15.44■□□□□ 0.06
UBQLN3Q9H347 AC139530.3-201ENST00000620344 690 ntBASIC15.44■□□□□ 0.06
UBQLN3Q9H347 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 AL391005.1-201ENST00000623953 2435 ntBASIC15.44■□□□□ 0.06
UBQLN3Q9H347 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 AL391256.1-201ENST00000443260 1855 ntBASIC15.44■□□□□ 0.06
UBQLN3Q9H347 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 LINC02199-201ENST00000506655 2702 ntBASIC15.44■□□□□ 0.06
UBQLN3Q9H347 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
UBQLN3Q9H347 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 BCAR1-209ENST00000546196 1340 ntBASIC15.43■□□□□ 0.06
UBQLN3Q9H347 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBQLN3Q9H347 AC011270.2-201ENST00000624293 2550 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms