Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTFDC1Q9BY42 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RTFDC1Q9BY42 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTFDC1Q9BY42 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTFDC1Q9BY42 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTFDC1Q9BY42 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.02■□□□□ 0.79
RTFDC1Q9BY42 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.02■□□□□ 0.79
RTFDC1Q9BY42 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 RAB43P1-201ENST00000561790 589 ntBASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.01■□□□□ 0.79
RTFDC1Q9BY42 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTFDC1Q9BY42 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20■□□□□ 0.79
RTFDC1Q9BY42 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
RTFDC1Q9BY42 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RTFDC1Q9BY42 ELK1P1-201ENST00000485699 580 ntBASIC20■□□□□ 0.79
RTFDC1Q9BY42 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20■□□□□ 0.79
RTFDC1Q9BY42 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTFDC1Q9BY42 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20■□□□□ 0.79
RTFDC1Q9BY42 AC023310.3-201ENST00000557027 670 ntBASIC20■□□□□ 0.79
RTFDC1Q9BY42 AC100756.1-201ENST00000562736 682 ntBASIC20■□□□□ 0.79
RTFDC1Q9BY42 AC138749.3-201ENST00000567691 622 ntBASIC20■□□□□ 0.79
RTFDC1Q9BY42 CTBP2P3-201ENST00000585629 1255 ntBASIC20■□□□□ 0.79
RTFDC1Q9BY42 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20■□□□□ 0.79
RTFDC1Q9BY42 AC026979.3-201ENST00000607315 403 ntBASIC20■□□□□ 0.79
RTFDC1Q9BY42 AC116165.1-201ENST00000611806 668 ntBASIC20■□□□□ 0.79
RTFDC1Q9BY42 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RTFDC1Q9BY42 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RTFDC1Q9BY42 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTFDC1Q9BY42 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTFDC1Q9BY42 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RTFDC1Q9BY42 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RTFDC1Q9BY42 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20■□□□□ 0.79
RTFDC1Q9BY42 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTFDC1Q9BY42 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTFDC1Q9BY42 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 MIR658-201ENST00000385210 100 ntBASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 MYCLP2-201ENST00000449268 967 ntBASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 TPRX2P-201ENST00000535362 881 ntBASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTFDC1Q9BY42 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms