Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VRK1Q99986 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.81□□□□□ -0.04
VRK1Q99986 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK1Q99986 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK1Q99986 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
VRK1Q99986 FLJ16779-201ENST00000612722 7638 ntBASIC14.8□□□□□ -0.04
VRK1Q99986 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 AC073621.1-201ENST00000392730 636 ntBASIC14.8□□□□□ -0.04
VRK1Q99986 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 ELK2BP-201ENST00000415014 1224 ntBASIC14.8□□□□□ -0.04
VRK1Q99986 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.8□□□□□ -0.04
VRK1Q99986 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
VRK1Q99986 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.8□□□□□ -0.04
VRK1Q99986 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.8□□□□□ -0.04
VRK1Q99986 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK1Q99986 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
VRK1Q99986 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.8□□□□□ -0.04
VRK1Q99986 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK1Q99986 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
VRK1Q99986 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.8□□□□□ -0.04
VRK1Q99986 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VRK1Q99986 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 LINC00304-203ENST00000565008 1864 ntBASIC14.8□□□□□ -0.04
VRK1Q99986 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VRK1Q99986 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VRK1Q99986 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
VRK1Q99986 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.79□□□□□ -0.04
VRK1Q99986 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.79□□□□□ -0.04
VRK1Q99986 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
VRK1Q99986 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VRK1Q99986 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
VRK1Q99986 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VRK1Q99986 MIR1233-2-201ENST00000408138 82 ntBASIC14.79□□□□□ -0.04
VRK1Q99986 MIR1233-1-201ENST00000408722 82 ntBASIC14.79□□□□□ -0.04
VRK1Q99986 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.79□□□□□ -0.04
VRK1Q99986 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.79□□□□□ -0.04
VRK1Q99986 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.79□□□□□ -0.04
VRK1Q99986 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VRK1Q99986 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.79□□□□□ -0.04
VRK1Q99986 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
VRK1Q99986 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.79□□□□□ -0.04
VRK1Q99986 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.79□□□□□ -0.04
VRK1Q99986 MIR4751-201ENST00000578027 74 ntBASIC14.79□□□□□ -0.04
VRK1Q99986 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.79□□□□□ -0.04
VRK1Q99986 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.79□□□□□ -0.04
VRK1Q99986 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
VRK1Q99986 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VRK1Q99986 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.79□□□□□ -0.04
VRK1Q99986 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VRK1Q99986 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
VRK1Q99986 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VRK1Q99986 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.78□□□□□ -0.04
VRK1Q99986 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.78□□□□□ -0.04
VRK1Q99986 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms