Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AF186996.4-201ENST00000467186 377 ntBASIC13.8□□□□□ -0.2
S1PR3Q99500 HLA-J-202ENST00000469281 1241 ntBASIC13.8□□□□□ -0.2
S1PR3Q99500 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.8□□□□□ -0.2
S1PR3Q99500 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.8□□□□□ -0.2
S1PR3Q99500 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
S1PR3Q99500 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.8□□□□□ -0.2
S1PR3Q99500 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.8□□□□□ -0.2
S1PR3Q99500 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
S1PR3Q99500 PI4KAP1-204ENST00000612579 1703 ntBASIC13.8□□□□□ -0.2
S1PR3Q99500 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
S1PR3Q99500 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
S1PR3Q99500 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
S1PR3Q99500 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.8□□□□□ -0.2
S1PR3Q99500 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
S1PR3Q99500 TOP3BP1-201ENST00000420768 1380 ntBASIC13.8□□□□□ -0.2
S1PR3Q99500 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
S1PR3Q99500 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
S1PR3Q99500 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
S1PR3Q99500 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
S1PR3Q99500 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
S1PR3Q99500 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
S1PR3Q99500 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
S1PR3Q99500 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
S1PR3Q99500 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.8□□□□□ -0.2
S1PR3Q99500 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
S1PR3Q99500 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.79□□□□□ -0.2
S1PR3Q99500 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.79□□□□□ -0.2
S1PR3Q99500 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.79□□□□□ -0.2
S1PR3Q99500 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.79□□□□□ -0.2
S1PR3Q99500 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.79□□□□□ -0.2
S1PR3Q99500 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.79□□□□□ -0.2
S1PR3Q99500 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.79□□□□□ -0.2
S1PR3Q99500 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
S1PR3Q99500 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.79□□□□□ -0.2
S1PR3Q99500 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.79□□□□□ -0.2
S1PR3Q99500 RNPS1P1-201ENST00000507437 918 ntBASIC13.79□□□□□ -0.2
S1PR3Q99500 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
S1PR3Q99500 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.79□□□□□ -0.2
S1PR3Q99500 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.79□□□□□ -0.2
S1PR3Q99500 AL160237.2-201ENST00000556165 472 ntBASIC13.79□□□□□ -0.2
S1PR3Q99500 DUX4L17-201ENST00000557360 1267 ntBASIC13.79□□□□□ -0.2
S1PR3Q99500 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.79□□□□□ -0.2
S1PR3Q99500 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.79□□□□□ -0.2
S1PR3Q99500 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
S1PR3Q99500 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.79□□□□□ -0.2
S1PR3Q99500 AC025062.2-201ENST00000605477 670 ntBASIC13.79□□□□□ -0.2
S1PR3Q99500 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
S1PR3Q99500 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
S1PR3Q99500 TP73-AS1-207ENST00000624167 988 ntBASIC13.79□□□□□ -0.2
S1PR3Q99500 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
S1PR3Q99500 AL139011.1-202ENST00000642063 584 ntBASIC13.79□□□□□ -0.2
S1PR3Q99500 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 AC006449.5-201ENST00000610658 2098 ntBASIC13.79□□□□□ -0.2
S1PR3Q99500 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.79□□□□□ -0.2
S1PR3Q99500 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
S1PR3Q99500 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
S1PR3Q99500 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
S1PR3Q99500 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.78□□□□□ -0.2
S1PR3Q99500 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
S1PR3Q99500 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.78□□□□□ -0.2
S1PR3Q99500 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
S1PR3Q99500 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
S1PR3Q99500 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
S1PR3Q99500 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
S1PR3Q99500 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
S1PR3Q99500 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
S1PR3Q99500 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
S1PR3Q99500 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
S1PR3Q99500 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
S1PR3Q99500 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
S1PR3Q99500 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
S1PR3Q99500 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
S1PR3Q99500 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.78□□□□□ -0.2
S1PR3Q99500 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.78□□□□□ -0.2
S1PR3Q99500 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
S1PR3Q99500 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms