Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNGAP1Q96PV0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNGAP1Q96PV0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 FOXO1B-201ENST00000504678 1527 ntBASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 HLA-V-204ENST00000476601 1289 ntBASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 PRYP6-201ENST00000514804 343 ntBASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 AC003101.2-201ENST00000612557 442 ntBASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 AC022144.1-201ENST00000602255 1580 ntBASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SYNGAP1Q96PV0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 HLA-H-201ENST00000383620 1096 ntBASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 PIN1P1-201ENST00000412108 996 ntBASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 AP005018.1-201ENST00000525475 301 ntBASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 SPDYE22P-201ENST00000582158 798 ntBASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 AC027307.3-201ENST00000594262 1100 ntBASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 AL138828.2-201ENST00000615812 383 ntBASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 AL358472.5-202ENST00000641448 1267 ntBASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SYNGAP1Q96PV0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 AC080080.1-201ENST00000625121 2420 ntBASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNGAP1Q96PV0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms