Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 AP002414.3-201ENST00000589352 1468 ntBASIC15.81■□□□□ 0.12
COL21A1Q96P44 AL049840.3-201ENST00000602669 611 ntBASIC15.81■□□□□ 0.12
COL21A1Q96P44 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 PGM5P2-202ENST00000637225 1043 ntBASIC15.81■□□□□ 0.12
COL21A1Q96P44 AL805961.1-202ENST00000641562 540 ntBASIC15.81■□□□□ 0.12
COL21A1Q96P44 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.8■□□□□ 0.12
COL21A1Q96P44 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 PTCHD3P3-201ENST00000403073 906 ntBASIC15.8■□□□□ 0.12
COL21A1Q96P44 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 AC092910.1-201ENST00000482027 1129 ntBASIC15.8■□□□□ 0.12
COL21A1Q96P44 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 AC005593.1-201ENST00000624894 515 ntBASIC15.8■□□□□ 0.12
COL21A1Q96P44 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 AC007950.2-201ENST00000615045 2347 ntBASIC15.8■□□□□ 0.12
COL21A1Q96P44 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.8■□□□□ 0.12
COL21A1Q96P44 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL21A1Q96P44 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 AL021920.2-201ENST00000624828 1351 ntBASIC15.79■□□□□ 0.12
COL21A1Q96P44 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 AP002414.1-201ENST00000391405 1147 ntBASIC15.79■□□□□ 0.12
COL21A1Q96P44 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL21A1Q96P44 RPS15P9-201ENST00000494093 319 ntBASIC15.79■□□□□ 0.12
COL21A1Q96P44 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.79■□□□□ 0.12
COL21A1Q96P44 DUX4L17-201ENST00000557360 1267 ntBASIC15.79■□□□□ 0.12
COL21A1Q96P44 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms