Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL596442.2-201ENST00000610240 980 ntBASIC17.16■□□□□ 0.34
RPRD1AQ96P16 AC026120.1-201ENST00000611536 926 ntBASIC17.16■□□□□ 0.34
RPRD1AQ96P16 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 AC016027.1-202ENST00000607927 1699 ntBASIC17.16■□□□□ 0.34
RPRD1AQ96P16 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 AC006538.1-201ENST00000567905 1585 ntBASIC17.15■□□□□ 0.34
RPRD1AQ96P16 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 TFAMP1-201ENST00000412727 736 ntBASIC17.15■□□□□ 0.34
RPRD1AQ96P16 DNAJB3-202ENST00000449667 1266 ntBASIC17.15■□□□□ 0.34
RPRD1AQ96P16 SPDYE11-202ENST00000450699 704 ntBASIC17.15■□□□□ 0.34
RPRD1AQ96P16 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 AL135744.1-201ENST00000565098 629 ntBASIC17.15■□□□□ 0.34
RPRD1AQ96P16 SPDYE9P-201ENST00000570642 692 ntBASIC17.15■□□□□ 0.34
RPRD1AQ96P16 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 SPDYE10P-202ENST00000612005 668 ntBASIC17.15■□□□□ 0.34
RPRD1AQ96P16 SPDYE8P-202ENST00000612377 668 ntBASIC17.15■□□□□ 0.34
RPRD1AQ96P16 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 AL512652.2-201ENST00000625156 1716 ntBASIC17.15■□□□□ 0.34
RPRD1AQ96P16 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RPRD1AQ96P16 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RPRD1AQ96P16 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
RPRD1AQ96P16 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 UBALD1-205ENST00000590891 2641 ntBASIC17.14■□□□□ 0.33
RPRD1AQ96P16 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 HLA-J-202ENST00000469281 1241 ntBASIC17.14■□□□□ 0.33
RPRD1AQ96P16 RN7SL589P-201ENST00000481268 310 ntBASIC17.14■□□□□ 0.33
RPRD1AQ96P16 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 SNHG9-202ENST00000564014 471 ntBASIC17.14■□□□□ 0.33
RPRD1AQ96P16 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 AKAP8P1-201ENST00000434743 1349 ntBASIC17.14■□□□□ 0.33
RPRD1AQ96P16 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms