Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX11Q96FC9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
DDX11Q96FC9 HMGN1P19-201ENST00000436976 333 ntBASIC19.81■□□□□ 0.76
DDX11Q96FC9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX11Q96FC9 PDPK2P-202ENST00000562415 1191 ntBASIC19.81■□□□□ 0.76
DDX11Q96FC9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
DDX11Q96FC9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX11Q96FC9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX11Q96FC9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DDX11Q96FC9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX11Q96FC9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX11Q96FC9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX11Q96FC9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.81■□□□□ 0.76
DDX11Q96FC9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX11Q96FC9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 ELL2P1-201ENST00000413990 1906 ntBASIC19.8■□□□□ 0.76
DDX11Q96FC9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 TUBB8P12-201ENST00000308911 1335 ntBASIC19.8■□□□□ 0.76
DDX11Q96FC9 TUBB7P-202ENST00000428444 1305 ntBASIC19.8■□□□□ 0.76
DDX11Q96FC9 TUBB8P7-204ENST00000567960 1332 ntBASIC19.8■□□□□ 0.76
DDX11Q96FC9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 AL391256.1-201ENST00000443260 1855 ntBASIC19.8■□□□□ 0.76
DDX11Q96FC9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 METTL21AP1-201ENST00000438852 635 ntBASIC19.8■□□□□ 0.76
DDX11Q96FC9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 KRT19P2-202ENST00000557173 1012 ntBASIC19.8■□□□□ 0.76
DDX11Q96FC9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 OR7E47P-204ENST00000575924 449 ntBASIC19.8■□□□□ 0.76
DDX11Q96FC9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 AC007064.4-201ENST00000637740 555 ntBASIC19.8■□□□□ 0.76
DDX11Q96FC9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX11Q96FC9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX11Q96FC9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 AC025580.3-201ENST00000617932 1424 ntBASIC19.79■□□□□ 0.76
DDX11Q96FC9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 HLA-A-202ENST00000376806 1854 ntBASIC19.79■□□□□ 0.76
DDX11Q96FC9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX11Q96FC9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX11Q96FC9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.78■□□□□ 0.76
DDX11Q96FC9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DDX11Q96FC9 CNN2P11-201ENST00000429351 262 ntBASIC19.78■□□□□ 0.76
DDX11Q96FC9 RHOQP3-201ENST00000437982 621 ntBASIC19.78■□□□□ 0.76
DDX11Q96FC9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms