Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
RPGRQ92834 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRQ92834 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.37■□□□□ 0.85
RPGRQ92834 AC044860.1-202ENST00000559481 777 ntBASIC20.37■□□□□ 0.85
RPGRQ92834 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.37■□□□□ 0.85
RPGRQ92834 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.37■□□□□ 0.85
RPGRQ92834 AC024267.1-201ENST00000582320 895 ntBASIC20.37■□□□□ 0.85
RPGRQ92834 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.37■□□□□ 0.85
RPGRQ92834 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRQ92834 AC008494.3-201ENST00000606615 944 ntBASIC20.37■□□□□ 0.85
RPGRQ92834 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.37■□□□□ 0.85
RPGRQ92834 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.37■□□□□ 0.85
RPGRQ92834 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRQ92834 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.36■□□□□ 0.85
RPGRQ92834 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RPGRQ92834 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RPGRQ92834 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.36■□□□□ 0.85
RPGRQ92834 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
RPGRQ92834 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.36■□□□□ 0.85
RPGRQ92834 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RPGRQ92834 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 AL512384.1-201ENST00000406683 331 ntBASIC20.36■□□□□ 0.85
RPGRQ92834 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRQ92834 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRQ92834 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
RPGRQ92834 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RPGRQ92834 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRQ92834 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRQ92834 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.36■□□□□ 0.85
RPGRQ92834 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.36■□□□□ 0.85
RPGRQ92834 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.36■□□□□ 0.85
RPGRQ92834 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRQ92834 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRQ92834 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RPGRQ92834 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RPGRQ92834 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 AC092068.3-201ENST00000587894 2016 ntBASIC20.36■□□□□ 0.85
RPGRQ92834 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRQ92834 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.36■□□□□ 0.85
RPGRQ92834 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRQ92834 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
RPGRQ92834 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
RPGRQ92834 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.35■□□□□ 0.85
RPGRQ92834 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 AC011495.1-201ENST00000498085 584 ntBASIC20.35■□□□□ 0.85
RPGRQ92834 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.35■□□□□ 0.85
RPGRQ92834 WASH4P-201ENST00000564273 1246 ntBASIC20.35■□□□□ 0.85
RPGRQ92834 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.35■□□□□ 0.85
RPGRQ92834 CHCHD2P3-201ENST00000603038 451 ntBASIC20.35■□□□□ 0.85
RPGRQ92834 AC004790.1-201ENST00000612686 536 ntBASIC20.35■□□□□ 0.85
RPGRQ92834 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
RPGRQ92834 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.35■□□□□ 0.85
RPGRQ92834 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RPGRQ92834 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRQ92834 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RPGRQ92834 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.34■□□□□ 0.85
RPGRQ92834 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.34■□□□□ 0.85
RPGRQ92834 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
RPGRQ92834 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.34■□□□□ 0.85
RPGRQ92834 AC093724.1-201ENST00000448659 1027 ntBASIC20.34■□□□□ 0.85
RPGRQ92834 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.34■□□□□ 0.85
RPGRQ92834 SPDYE18-201ENST00000510091 1050 ntBASIC20.34■□□□□ 0.85
RPGRQ92834 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.34■□□□□ 0.85
RPGRQ92834 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.34■□□□□ 0.85
RPGRQ92834 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.34■□□□□ 0.85
RPGRQ92834 AC132938.2-201ENST00000579188 680 ntBASIC20.34■□□□□ 0.85
RPGRQ92834 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RPGRQ92834 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.34■□□□□ 0.85
RPGRQ92834 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RPGRQ92834 AC007431.3-201ENST00000623221 587 ntBASIC20.34■□□□□ 0.85
RPGRQ92834 AL591163.1-201ENST00000641757 987 ntBASIC20.34■□□□□ 0.85
RPGRQ92834 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms