Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT9Q92600 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT9Q92600 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT9Q92600 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CNOT9Q92600 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT9Q92600 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.4■□□□□ 0.06
CNOT9Q92600 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNOT9Q92600 AL512652.2-201ENST00000625156 1716 ntBASIC15.4■□□□□ 0.06
CNOT9Q92600 AL353732.1-201ENST00000569618 1459 ntBASIC15.4■□□□□ 0.06
CNOT9Q92600 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.39■□□□□ 0.05
CNOT9Q92600 MST1L-201ENST00000442552 2185 ntBASIC15.39■□□□□ 0.05
CNOT9Q92600 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT9Q92600 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 AC005052.1-201ENST00000625181 2492 ntBASIC15.39■□□□□ 0.05
CNOT9Q92600 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CNOT9Q92600 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.39■□□□□ 0.05
CNOT9Q92600 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CNOT9Q92600 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CNOT9Q92600 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CNOT9Q92600 MRPL20P1-201ENST00000400819 433 ntBASIC15.39■□□□□ 0.05
CNOT9Q92600 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT9Q92600 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.39■□□□□ 0.05
CNOT9Q92600 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT9Q92600 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT9Q92600 CYP2A7P1-201ENST00000595391 815 ntBASIC15.39■□□□□ 0.05
CNOT9Q92600 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.39■□□□□ 0.05
CNOT9Q92600 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.39■□□□□ 0.05
CNOT9Q92600 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT9Q92600 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CNOT9Q92600 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.39■□□□□ 0.05
CNOT9Q92600 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.39■□□□□ 0.05
CNOT9Q92600 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CNOT9Q92600 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CNOT9Q92600 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNOT9Q92600 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CNOT9Q92600 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.38■□□□□ 0.05
CNOT9Q92600 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.38■□□□□ 0.05
CNOT9Q92600 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.38■□□□□ 0.05
CNOT9Q92600 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.38■□□□□ 0.05
CNOT9Q92600 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.38■□□□□ 0.05
CNOT9Q92600 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CNOT9Q92600 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.38■□□□□ 0.05
CNOT9Q92600 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 RNA5SP419-201ENST00000515908 135 ntBASIC15.38■□□□□ 0.05
CNOT9Q92600 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.38■□□□□ 0.05
CNOT9Q92600 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.38■□□□□ 0.05
CNOT9Q92600 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.38■□□□□ 0.05
CNOT9Q92600 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
CNOT9Q92600 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.38■□□□□ 0.05
CNOT9Q92600 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.38■□□□□ 0.05
CNOT9Q92600 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
CNOT9Q92600 AC116407.3-201ENST00000623905 1129 ntBASIC15.38■□□□□ 0.05
CNOT9Q92600 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.38■□□□□ 0.05
CNOT9Q92600 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.38■□□□□ 0.05
CNOT9Q92600 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.38■□□□□ 0.05
CNOT9Q92600 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
CNOT9Q92600 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
CNOT9Q92600 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.38■□□□□ 0.05
CNOT9Q92600 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CNOT9Q92600 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNOT9Q92600 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms