Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 AC025048.3-201ENST00000590609 569 ntBASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 AC099568.2-201ENST00000609194 695 ntBASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 AC005702.4-201ENST00000618393 416 ntBASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 AL109936.8-201ENST00000641772 604 ntBASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CASKIN1Q8WXD9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 SPDYE19P-201ENST00000338590 713 ntBASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 AC055876.2-201ENST00000531834 546 ntBASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 RNF216P1-203ENST00000404404 2427 ntBASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC25.48■■□□□ 1.67
CASKIN1Q8WXD9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 AC245100.5-201ENST00000452108 331 ntBASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC25.47■■□□□ 1.67
CASKIN1Q8WXD9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 DGCR5-201ENST00000399539 862 ntBASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 CHCHD2P3-201ENST00000603038 451 ntBASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 AC005622.1-201ENST00000636801 1703 ntBASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 SDHAP3-202ENST00000515467 728 ntBASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC25.46■■□□□ 1.67
CASKIN1Q8WXD9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms