Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AC026471.5-201ENST00000615068 467 ntBASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L1Q8WWY6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 REXO1L8P-201ENST00000604378 1897 ntBASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 RBM17P1-201ENST00000453646 1190 ntBASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 EGLN1P1-201ENST00000531623 762 ntBASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 AL359736.2-201ENST00000621992 437 ntBASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 CICP13-201ENST00000422015 2789 ntBASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 AP002414.2-201ENST00000591780 3365 ntBASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 AL671710.1-201ENST00000610245 2349 ntBASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L1Q8WWY6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 MIR648-201ENST00000385046 94 ntBASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 HLA-F-220ENST00000434407 884 ntBASIC13.09□□□□□ -0.31
MBD3L1Q8WWY6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms