Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 AC020914.3-201ENST00000594712 304 ntBASIC11□□□□□ -0.65
ALMS1Q8TCU4 AC008687.7-202ENST00000637404 953 ntBASIC11□□□□□ -0.65
ALMS1Q8TCU4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ALMS1Q8TCU4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
ALMS1Q8TCU4 CNN2P8-201ENST00000421872 913 ntBASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 BRI3BPP1-201ENST00000594224 787 ntBASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 PTP4A1P2-201ENST00000546033 454 ntBASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 AL049840.4-201ENST00000602422 811 ntBASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ALMS1Q8TCU4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 TARDBPP1-201ENST00000442013 1203 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 RN7SL399P-201ENST00000471648 279 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms