Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SIMC1Q8NDZ2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 MRPL20P1-201ENST00000400819 433 ntBASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 RPL13AP23-201ENST00000480739 586 ntBASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 MIR4751-201ENST00000578027 74 ntBASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 Z83851.2-201ENST00000609564 659 ntBASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 AL662844.4-201ENST00000606367 2838 ntBASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIMC1Q8NDZ2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 AC120114.3-201ENST00000611923 658 ntBASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 ACTL9-202ENST00000612068 1252 ntBASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 SNX33P1-201ENST00000592116 1762 ntBASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 HLA-A-202ENST00000376806 1854 ntBASIC15.74■□□□□ 0.11
SIMC1Q8NDZ2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 AC006277.1-201ENST00000624348 1610 ntBASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
SIMC1Q8NDZ2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms