Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 AC087499.6-201ENST00000411576 835 ntBASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 AC112492.5-201ENST00000421897 457 ntBASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 AC093004.1-201ENST00000508850 424 ntBASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.69■□□□□ 0.9
CARMIL3Q8ND23 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 AC006277.1-201ENST00000624348 1610 ntBASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 AC017083.2-201ENST00000608069 979 ntBASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 AC007431.3-201ENST00000623221 587 ntBASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 LINC02012-201ENST00000608206 1725 ntBASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 AC141586.5-201ENST00000624546 2050 ntBASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CARMIL3Q8ND23 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CARMIL3Q8ND23 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 LTB4R2-202ENST00000528054 3092 ntBASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 SPDYE19P-201ENST00000338590 713 ntBASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CARMIL3Q8ND23 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms