Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 TERC-201ENST00000602385 541 ntBASIC16.51■□□□□ 0.23
SNX31Q8N9S9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX31Q8N9S9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 UNC93B7-201ENST00000509439 705 ntBASIC16.5■□□□□ 0.23
SNX31Q8N9S9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 AC021087.4-201ENST00000563761 564 ntBASIC16.5■□□□□ 0.23
SNX31Q8N9S9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 AC007950.2-201ENST00000615045 2347 ntBASIC16.5■□□□□ 0.23
SNX31Q8N9S9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX31Q8N9S9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 DUX4L17-201ENST00000557360 1267 ntBASIC16.49■□□□□ 0.23
SNX31Q8N9S9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 AC025062.2-201ENST00000605477 670 ntBASIC16.49■□□□□ 0.23
SNX31Q8N9S9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 AC004706.3-202ENST00000621574 984 ntBASIC16.49■□□□□ 0.23
SNX31Q8N9S9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SNX31Q8N9S9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms