Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHTF2Q8N3S3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHTF2Q8N3S3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.22■□□□□ 0.35
PHTF2Q8N3S3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PHTF2Q8N3S3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PHTF2Q8N3S3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PHTF2Q8N3S3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.22■□□□□ 0.35
PHTF2Q8N3S3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHTF2Q8N3S3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHTF2Q8N3S3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.22■□□□□ 0.35
PHTF2Q8N3S3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 RNU1-129P-201ENST00000384064 167 ntBASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 BCRP1-201ENST00000444246 691 ntBASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 AL512356.2-201ENST00000546955 174 ntBASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 U1.21-201ENST00000580816 167 ntBASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 AL390955.2-201ENST00000603032 514 ntBASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 AC084121.4-201ENST00000641598 221 ntBASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 AF228730.8-201ENST00000642140 221 ntBASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHTF2Q8N3S3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.21■□□□□ 0.34
PHTF2Q8N3S3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
PHTF2Q8N3S3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PHTF2Q8N3S3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 KRT18P32-201ENST00000424695 1287 ntBASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 AC011467.4-201ENST00000594891 528 ntBASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.2■□□□□ 0.34
PHTF2Q8N3S3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PHTF2Q8N3S3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms