Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 AC092364.2-201ENST00000596710 2692 ntBASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC116Q8IYX3 AC012569.1-201ENST00000591191 1524 ntBASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 Z83851.2-201ENST00000609564 659 ntBASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 AC005052.1-201ENST00000625181 2492 ntBASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 AL139384.1-201ENST00000612143 3047 ntBASIC15.73■□□□□ 0.11
CCDC116Q8IYX3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 RN7SL832P-201ENST00000607781 1756 ntBASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 AC104109.2-201ENST00000602919 1418 ntBASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 AL513480.1-201ENST00000451731 511 ntBASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 RPL13AP23-201ENST00000480739 586 ntBASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC116Q8IYX3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms