Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 PKD1P1-201ENST00000458669 6805 ntBASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 AC141586.5-201ENST00000624546 2050 ntBASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 HLA-V-201ENST00000429037 534 ntBASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 AL844908.2-201ENST00000609461 460 ntBASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 CROCCP2-202ENST00000412962 2773 ntBASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 AC138969.3-201ENST00000546612 1459 ntBASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 AC138932.2-201ENST00000548268 1459 ntBASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 AC126755.4-201ENST00000549796 1459 ntBASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 OR6D1P-202ENST00000641007 5290 ntBASIC16.47■□□□□ 0.23
TMEFF1Q8IYR6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 AC139713.2-201ENST00000641328 2723 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 ARSEP1-201ENST00000420443 635 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 AL353779.1-201ENST00000434793 351 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 U91328.1-201ENST00000437528 223 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 API5-211ENST00000534695 560 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 AC140912.1-201ENST00000577171 1054 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 AC004840.1-201ENST00000636359 365 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 AC026471.1-201ENST00000564629 3026 ntBASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TMEFF1Q8IYR6 AC073439.1-201ENST00000624121 1774 ntBASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms