Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
C12orf56Q8IXR9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C12orf56Q8IXR9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
C12orf56Q8IXR9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C12orf56Q8IXR9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 AC005622.1-201ENST00000636801 1703 ntBASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf56Q8IXR9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 AL592424.1-201ENST00000563624 1536 ntBASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 FAM86C2P-203ENST00000528684 1004 ntBASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 AC073389.1-201ENST00000595595 795 ntBASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 AC073439.1-201ENST00000624121 1774 ntBASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf56Q8IXR9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms