Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC135050.7-201ENST00000624508 2218 ntBASIC23.21■■□□□ 1.31
UBR1Q8IWV7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.31
UBR1Q8IWV7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
UBR1Q8IWV7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
UBR1Q8IWV7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC23.2■■□□□ 1.31
UBR1Q8IWV7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 GPAA1P2-201ENST00000417923 928 ntBASIC23.2■■□□□ 1.3
UBR1Q8IWV7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 RPL13P2-201ENST00000440687 659 ntBASIC23.2■■□□□ 1.3
UBR1Q8IWV7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
UBR1Q8IWV7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 AC133539.2-201ENST00000604757 467 ntBASIC23.19■■□□□ 1.3
UBR1Q8IWV7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 AC006033.1-201ENST00000440505 426 ntBASIC23.19■■□□□ 1.3
UBR1Q8IWV7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 MIR3615-201ENST00000581999 87 ntBASIC23.19■■□□□ 1.3
UBR1Q8IWV7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 AC092068.3-201ENST00000587894 2016 ntBASIC23.19■■□□□ 1.3
UBR1Q8IWV7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBR1Q8IWV7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 AC004408.2-201ENST00000623613 2777 ntBASIC23.18■■□□□ 1.3
UBR1Q8IWV7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 TIMM17BP1-201ENST00000545713 516 ntBASIC23.18■■□□□ 1.3
UBR1Q8IWV7 PTP4A1P2-201ENST00000546033 454 ntBASIC23.18■■□□□ 1.3
UBR1Q8IWV7 AL359711.2-201ENST00000563105 872 ntBASIC23.18■■□□□ 1.3
UBR1Q8IWV7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 AL049840.4-201ENST00000602422 811 ntBASIC23.18■■□□□ 1.3
UBR1Q8IWV7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
UBR1Q8IWV7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms