Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 AL589702.1-201ENST00000641229 1509 ntBASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 AL391256.1-201ENST00000443260 1855 ntBASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.71■□□□□ 0.43
NPAS4Q8IUM7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.71■□□□□ 0.42
NPAS4Q8IUM7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NPAS4Q8IUM7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
NPAS4Q8IUM7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
NPAS4Q8IUM7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 U91328.1-201ENST00000437528 223 ntBASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 DOC2GP-202ENST00000514950 1163 ntBASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 AC044860.1-202ENST00000559481 777 ntBASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 MIR6752-201ENST00000618442 71 ntBASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS4Q8IUM7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 SPDYE19P-201ENST00000338590 713 ntBASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 DGCR5-201ENST00000399539 862 ntBASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 AP006294.1-201ENST00000415407 339 ntBASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 ARSEP1-201ENST00000420443 635 ntBASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 ATP5G2P4-201ENST00000442175 420 ntBASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 AC061975.2-201ENST00000581722 295 ntBASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS4Q8IUM7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 KRT8P12-202ENST00000472924 1397 ntBASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AC068880.1-201ENST00000507289 2297 ntBASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AC114501.2-201ENST00000439631 535 ntBASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 GPR53P-205ENST00000457298 1084 ntBASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms