Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 DUTP2-201ENST00000519164 463 ntBASIC17.49■□□□□ 0.39
ALYREFQ86V81 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 AL162274.1-201ENST00000617191 1098 ntBASIC17.49■□□□□ 0.39
ALYREFQ86V81 AP001059.3-201ENST00000619053 235 ntBASIC17.49■□□□□ 0.39
ALYREFQ86V81 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALYREFQ86V81 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ALYREFQ86V81 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 SPDYE21P-201ENST00000413323 827 ntBASIC17.48■□□□□ 0.39
ALYREFQ86V81 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.48■□□□□ 0.39
ALYREFQ86V81 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALYREFQ86V81 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ALYREFQ86V81 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.47■□□□□ 0.39
ALYREFQ86V81 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
ALYREFQ86V81 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.47■□□□□ 0.39
ALYREFQ86V81 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.47■□□□□ 0.39
ALYREFQ86V81 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.47■□□□□ 0.39
ALYREFQ86V81 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.47■□□□□ 0.39
ALYREFQ86V81 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
ALYREFQ86V81 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
ALYREFQ86V81 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALYREFQ86V81 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ALYREFQ86V81 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms