Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 KRT8P39-201ENST00000396270 1433 ntBASIC15.97■□□□□ 0.15
RNF44Q7L0R7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 AC092474.2-201ENST00000424288 719 ntBASIC15.97■□□□□ 0.15
RNF44Q7L0R7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 AL161645.1-201ENST00000622716 1255 ntBASIC15.97■□□□□ 0.15
RNF44Q7L0R7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 AL671710.1-201ENST00000610245 2349 ntBASIC15.96■□□□□ 0.15
RNF44Q7L0R7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 AC211486.1-202ENST00000416371 468 ntBASIC15.96■□□□□ 0.15
RNF44Q7L0R7 AP006288.1-201ENST00000446065 395 ntBASIC15.96■□□□□ 0.15
RNF44Q7L0R7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 CEND1P1-201ENST00000451006 455 ntBASIC15.96■□□□□ 0.15
RNF44Q7L0R7 AC004967.1-201ENST00000453589 447 ntBASIC15.96■□□□□ 0.15
RNF44Q7L0R7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 AC211476.1-201ENST00000503899 468 ntBASIC15.96■□□□□ 0.15
RNF44Q7L0R7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RNF44Q7L0R7 AC080080.1-201ENST00000625121 2420 ntBASIC15.96■□□□□ 0.15
RNF44Q7L0R7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.96■□□□□ 0.14
RNF44Q7L0R7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF44Q7L0R7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF44Q7L0R7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF44Q7L0R7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RNF44Q7L0R7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.96■□□□□ 0.14
RNF44Q7L0R7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
RNF44Q7L0R7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.96■□□□□ 0.14
RNF44Q7L0R7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF44Q7L0R7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF44Q7L0R7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms