Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 CHCHD2P8-201ENST00000429873 447 ntBASIC14.62□□□□□ -0.07
C11orf88Q6PI97 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 PRELID1P1-202ENST00000567272 903 ntBASIC14.62□□□□□ -0.07
C11orf88Q6PI97 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C11orf88Q6PI97 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 AC111152.3-201ENST00000569699 673 ntBASIC14.6□□□□□ -0.07
C11orf88Q6PI97 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
C11orf88Q6PI97 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms