Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 RPL17P11-201ENST00000417593 544 ntBASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 AL355334.1-201ENST00000417713 215 ntBASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 AL162726.2-201ENST00000438986 1017 ntBASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 MIR6069-201ENST00000620069 79 ntBASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 LYSMD4-203ENST00000378904 2122 ntBASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.09□□□□□ -0.15
HIST2H2BCQ6DN03 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HIST2H2BCQ6DN03 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
HIST2H2BCQ6DN03 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HIST2H2BCQ6DN03 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HIST2H2BCQ6DN03 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 RN7SL399P-201ENST00000471648 279 ntBASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 IMP3P2-201ENST00000489760 475 ntBASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 AC068587.3-201ENST00000526613 355 ntBASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 CHMP4BP1-201ENST00000556017 588 ntBASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 AL359711.2-201ENST00000563105 872 ntBASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 AC244452.3-201ENST00000636814 210 ntBASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST2H2BCQ6DN03 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST2H2BCQ6DN03 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST2H2BCQ6DN03 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HIST2H2BCQ6DN03 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HIST2H2BCQ6DN03 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HIST2H2BCQ6DN03 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HIST2H2BCQ6DN03 MSTO2P-201ENST00000314835 1709 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms