Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD4Q5XG99 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 TTTY23B-201ENST00000442790 549 ntBASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 SDHAP3-202ENST00000515467 728 ntBASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 TPRX2P-201ENST00000535362 881 ntBASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 SRD5A3P1-201ENST00000603021 949 ntBASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 AL033527.5-202ENST00000641632 1098 ntBASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LYSMD4Q5XG99 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LYSMD4Q5XG99 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.18
LYSMD4Q5XG99 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.21■□□□□ 0.18
LYSMD4Q5XG99 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LYSMD4Q5XG99 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
LYSMD4Q5XG99 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 KRT8P12-202ENST00000472924 1397 ntBASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD4Q5XG99 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 MYCLP2-201ENST00000449268 967 ntBASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 RN7SL837P-201ENST00000463010 287 ntBASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms